Tag: ucsc

The Meaning of Red

A previous post in Manuel Corpas’ Blog in March 2010 noted that there was disagreement among the leading Copy Number Variation (CNV) repositories in one small but significant detail. Some of them displayed gains in green, others in blue. The same with loses: no consensus existed in the […]

Remapping from NCBI36/hg18 to GRCh37/hg19

Given the huge response I have at work about remapping features into another assembly, I present here an adapted version for how to remap a feature from NCBI36/hg18 to GRCh37/hg19 using UCSC’s liftOver tool. Important: Please make sure you know in advance the assembly to which your aberration […]